ISMARA results: SOX{8,9,10}.p2

Motif ID: SOX{8,9,10}.p2

Gene Symbol	Entrez ID	Gene Name
SOX10	6663	SRY (sex determining region Y)-box 10
SOX8	30812	SRY (sex determining region Y)-box 8
SOX9	6662	SRY (sex determining region Y)-box 9

Gene	Promoter	Pearson	P-value	Plot
SOX10	chr22_-_36710484	0.57	2.0e-02	Click!
SOX9	chr17_+_67628763	0.31	2.4e-01	Click!
SOX8	chr16_+_972064	0.29	2.8e-01	Click!

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr6_-_128883125	6.222	NM_002844 NM_001135648	PTPRK	protein tyrosine phosphatase, receptor type, K
chr4_-_7991992	4.023	NM_001134647 NM_198595	AFAP1	actin filament associated protein 1
chr7_-_27171600	3.622		HOXA9	homeobox A9
chr7_-_27171673	3.518	NM_152739	HOXA9	homeobox A9
chr7_-_27171648	3.375		HOXA9	homeobox A9
chr6_+_114285209	3.375	NM_002356	MARCKS	myristoylated alanine-rich protein kinase C substrate
chr12_-_6103945	3.364	NM_000552	VWF	von Willebrand factor
chr1_-_197173159	3.358		LOC100131234	familial acute myelogenous leukemia related factor
chr5_-_16989371	3.225	NM_012334	MYO10	myosin X
chr5_-_16989290	3.203		MYO10	myosin X
chr1_-_95165037	2.948		CNN3	calponin 3, acidic
chr6_-_11340869	2.865		NEDD9	neural precursor cell expressed, developmentally down-regulated 9
chr6_+_148705421	2.851	NM_015278	SASH1	SAM and SH3 domain containing 1
chr2_+_101680594	2.824	NM_004834 NM_145686 NM_145687	MAP4K4	mitogen-activated protein kinase kinase kinase kinase 4
chr6_-_11340886	2.755		NEDD9	neural precursor cell expressed, developmentally down-regulated 9
chr6_-_11340887	2.717	NM_006403 NM_182966	NEDD9	neural precursor cell expressed, developmentally down-regulated 9
chr3_+_195336625	2.665	NM_005524	HES1	hairy and enhancer of split 1, (Drosophila)
chr14_+_85066265	2.656		FLRT2	fibronectin leucine rich transmembrane protein 2
chr11_+_101488380	2.625	NM_001195045	YAP1	Yes-associated protein 1
chr3_-_189354510	2.623		LOC339929	hypothetical LOC339929

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Showing 1 to 20 of 23 entries

enrichment	p-value	GO term	description
2.00	1.44e-04	GO:0007264	small GTPase mediated signal transduction
1.97	4.62e-02	GO:0030036	actin cytoskeleton organization
1.94	1.72e-02	GO:0030029	actin filament-based process
1.74	4.17e-02	GO:0007409	axonogenesis
1.57	1.35e-02	GO:0007155	cell adhesion
1.57	1.35e-02	GO:0022610	biological adhesion
1.55	1.02e-02	GO:0051128	regulation of cellular component organization
1.42	2.77e-03	GO:0007399	nervous system development
1.39	1.32e-02	GO:0009653	anatomical structure morphogenesis
1.35	2.15e-07	GO:0007275	multicellular organismal development
1.33	5.22e-05	GO:0048731	system development
1.32	3.64e-07	GO:0032502	developmental process
1.32	2.32e-05	GO:0048856	anatomical structure development
1.32	1.32e-02	GO:0048869	cellular developmental process
1.31	3.41e-02	GO:0030154	cell differentiation
1.26	2.21e-03	GO:0016043	cellular component organization
1.26	4.86e-02	GO:0071842	cellular component organization at cellular level
1.24	7.87e-03	GO:0071840	cellular component organization or biogenesis
1.21	2.12e-04	GO:0032501	multicellular organismal process
1.16	6.73e-04	GO:0050789	regulation of biological process

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Showing 1 to 11 of 11 entries

enrichment	p-value	GO term	description
2.44	1.45e-02	GO:0030055	cell-substrate junction
2.44	3.03e-02	GO:0005925	focal adhesion
2.39	2.82e-04	GO:0070161	anchoring junction
2.36	1.66e-03	GO:0005912	adherens junction
1.92	2.13e-02	GO:0016323	basolateral plasma membrane
1.80	2.40e-02	GO:0015629	actin cytoskeleton
1.67	4.90e-02	GO:0031012	extracellular matrix
1.66	9.02e-04	GO:0030054	cell junction
1.39	7.45e-04	GO:0005856	cytoskeleton
1.07	1.29e-02	GO:0005622	intracellular
1.07	4.41e-02	GO:0044424	intracellular part

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Showing 1 to 4 of 4 entries

enrichment	p-value	GO term	description
1.84	7.19e-03	GO:0003779	actin binding
1.63	8.22e-03	GO:0008092	cytoskeletal protein binding
1.18	1.89e-06	GO:0005515	protein binding
1.09	1.13e-05	GO:0005488	binding